Hi,
i encountered a very weird problem when I want to use RGeostats.
After install I tried to load the package in RStudio that instantly crashes, same in R, also when I first load Rcpp.
I use
Mac OS 10.11.5
R 3.3.1
RStudio 0.99.902
After installing the package
RGeostats_11.0.1_macosx.tar (same with RGeostats_11.0.1_macosx.tgz)
via RStudio - install.packages(..., type = "binary") everything seemed fine until i tried to load the package,
then R as well as RStudio crash with the error message window "R session aborted - fatal error - the session was terminated"
so I uninstalled RGeostats and re-did the install via the terminal
1) open R with empty workspace - ok
2) download package - ok
3) terminal install: R CMD INSTALL /.../RGeostats_11.0.1_macosx.tgz
-> result: ...DONE (RGeostats)
then I opened R and loaded the package Rcpp first
and the tried RGeostats
-> result:
starting httpd help server ... done
*** caught segfault ***
address 0x18, cause 'memory not mapped'
Traceback:
1: .Call("R_constant_reset", PACKAGE = "RGeostats")
2: constant.reset()
3: environ.load()
4: fun(libname, pkgname)
5: doTryCatch(return(expr), name, parentenv, handler)
6: tryCatchOne(expr, names, parentenv, handlers[[1L]])
7: tryCatchList(expr, classes, parentenv, handlers)
8: tryCatch(fun(libname, pkgname), error = identity)
9: runHook(".onAttach", ns, dirname(nspath), nsname)
10: attachNamespace(ns, pos = pos, deps)
11: doTryCatch(return(expr), name, parentenv, handler)
12: tryCatchOne(expr, names, parentenv, handlers[[1L]])
13: tryCatchList(expr, classes, parentenv, handlers)
14: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call)[1L] prefix <- paste("Error in", dcall, ": ") LONG <- 75L msg <- conditionMessage(e) sm <- strsplit(msg, "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && identical(getOption("show.error.messages"), TRUE)) { cat(msg, file = stderr()) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
15: try({ attr(package, "LibPath") <- which.lib.loc ns <- loadNamespace(package, lib.loc) env <- attachNamespace(ns, pos = pos, deps)})
16: library(RGeostats)
Possible actions:
1: abort (with core dump, if enabled)
2: normal R exit
3: exit R without saving workspace
4: exit R saving workspace
>
Selection:
Does anyone has a clue how to solve this weird situation?
Any idea which damon might collide with the C code of RGeostats?
thanks,
margret